{"id":44,"date":"2022-10-19T15:06:18","date_gmt":"2022-10-19T13:06:18","guid":{"rendered":"http:\/\/proteome.u-bordeaux.fr\/?page_id=44"},"modified":"2026-09-17T08:32:56","modified_gmt":"2026-09-17T06:32:56","slug":"home","status":"publish","type":"page","link":"https:\/\/proteome.u-bordeaux.fr\/en\/","title":{"rendered":"Welcome"},"content":{"rendered":"<p class=\"justification_texte wp-block-paragraph translation-block\"><strong>Bordeaux Proteome <\/strong>has been a CNRS <strong>UAR 2046 <\/strong>(Research Support and Research Unit) since January 2026. It is a leading scientific and technological platform in proteomics and mass spectrometry. Open to both academic and private-sector communities, Bordeaux Proteome provides expertise, state-of-the-art equipment and tailored services to support research, development and innovation projects.<\/p>\n\n\n\n<p class=\"justification_texte wp-block-paragraph\">Based on innovative technologies and methodologies and a state-of-the-art instrument suite, the Bordeaux Proteome UAR offers services in protein analysis using mass spectrometry and associated separation techniques.<\/p>\n\n\n\n<p class=\"justification_texte wp-block-paragraph\">A complete service offer integrating the identification, characterization and quantification \/ differential analysis of proteins is offered by the platform.<\/p>\n\n\n\n<p class=\"justification_texte wp-block-paragraph\">Depuis 2015, Bordeaux Proteome est certifi\u00e9e ISO 9001 et NF X 50-900.&nbsp;Le Syst\u00e8me de Management de la Qualit\u00e9 certifi\u00e9 concerne nos activit\u00e9s : Recherche, d\u00e9veloppement technologique et expertise en spectrom\u00e9trie de masse et prot\u00e9omique.<\/p>\n\n\n\n<h2 class=\"wp-block-heading has-accent-color has-text-color\">Our expertise<\/h2>\n\n\n\n<ul class=\"wp-block-list\">\n<li>Identification of proteins in complex mixtures.<\/li>\n\n\n\n<li>Quantitation and measurement of protein differential expression with \/ without labeling<\/li>\n\n\n\n<li>Characterization of co\/post-translational modifications<\/li>\n\n\n\n<li class=\"translation-block\">de novo sequencing<\/li>\n\n\n\n<li>Protein partners identification (Interactomics, protein complexes).<\/li>\n<\/ul>\n\n\n\n<h2 class=\"wp-block-heading has-accent-color has-text-color\">Our services<\/h2>\n\n\n\n<p class=\"has-text-align-center has-medium-font-size wp-block-paragraph\">One facility<\/p>\n\n\n\n<p class=\"has-text-align-center has-medium-font-size wp-block-paragraph\">One organization<\/p>\n\n\n\n<p class=\"has-text-align-center has-medium-font-size wp-block-paragraph\">Several activities<\/p>\n\n\n\n<div class=\"wp-block-columns is-layout-flex wp-container-core-columns-is-layout-7387b849 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<figure class=\"wp-block-image size-full\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" width=\"250\" height=\"250\" src=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-1-copie.png?resize=250%2C250&#038;ssl=1\" alt=\"Logo Life Science\" class=\"wp-image-1544\" srcset=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-1-copie.png?w=250&amp;ssl=1 250w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-1-copie.png?resize=150%2C150&amp;ssl=1 150w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-1-copie.png?resize=12%2C12&amp;ssl=1 12w\" sizes=\"auto, (max-width: 250px) 100vw, 250px\" \/><\/figure>\n<\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<figure class=\"wp-block-image size-full\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" width=\"250\" height=\"250\" src=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-4-copie.png?resize=250%2C250&#038;ssl=1\" alt=\"Logo Heritage\" class=\"wp-image-1545\" title=\"Logo Heritage\" srcset=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-4-copie.png?w=250&amp;ssl=1 250w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-4-copie.png?resize=150%2C150&amp;ssl=1 150w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-4-copie.png?resize=12%2C12&amp;ssl=1 12w\" sizes=\"auto, (max-width: 250px) 100vw, 250px\" \/><\/figure>\n<\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<figure class=\"wp-block-image size-full is-resized\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" width=\"250\" height=\"250\" src=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-6-copie.png?resize=250%2C250&#038;ssl=1\" alt=\"Logo MS Imaging\" class=\"wp-image-1546\" style=\"width:203px;height:auto\" srcset=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-6-copie.png?w=250&amp;ssl=1 250w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-6-copie.png?resize=150%2C150&amp;ssl=1 150w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-6-copie.png?resize=12%2C12&amp;ssl=1 12w\" sizes=\"auto, (max-width: 250px) 100vw, 250px\" \/><\/figure>\n<\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<figure class=\"wp-block-image size-full\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" width=\"250\" height=\"250\" src=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-10-copie.png?resize=250%2C250&#038;ssl=1\" alt=\"Logo M3S\" class=\"wp-image-1547\" srcset=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-10-copie.png?w=250&amp;ssl=1 250w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-10-copie.png?resize=150%2C150&amp;ssl=1 150w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2024\/01\/LOGO-DECLI-STEPH-10-copie.png?resize=12%2C12&amp;ssl=1 12w\" sizes=\"auto, (max-width: 250px) 100vw, 250px\" \/><\/figure>\n<\/div>\n<\/div>\n\n\n\n<div class=\"wp-block-columns is-layout-flex wp-container-core-columns-is-layout-7387b849 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Differential proteomics<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Biomarkers identification<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Interactomics<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">PTMs modifications<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Deep Proteome<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Clinical cohorts<\/p>\n<\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Multi-omic analysis\n(proteins, lipids, polysaccharides)<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Trace analysis<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Taxonomic identification<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph translation-block\">de novo sequencing<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Protein modifications<\/p>\n<\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Spatial distribution on tissues<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">multi-omics<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">multi-modal<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Exogeneous compound quantification using MALDI MSI<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">MSI data processing<\/p>\n<\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Glycosylation profiling<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Protein complexes<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Protein-protein\/ligand interactions<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Crosslinking<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">HDX-MS<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Affinity-based protein profiling<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">LiP-MS (limited proteolysis)<\/p>\n\n\n\n<p class=\"has-text-align-center has-small-font-size wp-block-paragraph\">Top-Down MS protein characterization<\/p>\n<\/div>\n<\/div>\n\n\n\n<div class=\"wp-block-columns is-layout-flex wp-container-core-columns-is-layout-7387b849 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<p class=\"wp-block-paragraph\"><\/p>\n<\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<p class=\"has-text-align-center wp-block-paragraph\"><a aria-label=\"EU-IPERION HS Platform (opens in a new tab)\" class=\"ek-link\" href=\"https:\/\/www.iperionhs.eu\/tool\/165\/\" target=\"_blank\" rel=\"noreferrer noopener\">EU-IPERION HS Platform<\/a><br> <a href=\"https:\/\/www.iperionhs.eu\/tool\/165\/\" target=\"_blank\" rel=\"noopener\" title=\"\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" width=\"150\" height=\"145\" class=\"wp-image-1352\" style=\"width: 150px;\" src=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/logo-iperion.png?resize=150%2C145&#038;ssl=1\" alt=\"logo Iperion\" srcset=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/logo-iperion.png?w=152&amp;ssl=1 152w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/logo-iperion.png?resize=12%2C12&amp;ssl=1 12w\" sizes=\"auto, (max-width: 150px) 100vw, 150px\" \/><\/a><br><br><a aria-label=\" (opens in a new tab)\" class=\"ek-link\" href=\"https:\/\/arche.cnrs.fr\/\" target=\"_blank\" rel=\"noreferrer noopener\">ARCHE International Lab Platform<\/a><br><a href=\"https:\/\/arche.cnrs.fr\/laboratory\/\" target=\"_blank\" rel=\"noopener\" title=\"\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" width=\"150\" height=\"56\" class=\"wp-image-1353\" style=\"width: 150px;\" src=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/LOGO-ARCHE-30x9-cm_CMJN-min-2048x768-1.jpg?resize=150%2C56&#038;ssl=1\" alt=\"logo arche\" srcset=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/LOGO-ARCHE-30x9-cm_CMJN-min-2048x768-1.jpg?w=2048&amp;ssl=1 2048w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/LOGO-ARCHE-30x9-cm_CMJN-min-2048x768-1.jpg?resize=300%2C113&amp;ssl=1 300w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/LOGO-ARCHE-30x9-cm_CMJN-min-2048x768-1.jpg?resize=1024%2C384&amp;ssl=1 1024w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/LOGO-ARCHE-30x9-cm_CMJN-min-2048x768-1.jpg?resize=768%2C288&amp;ssl=1 768w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/LOGO-ARCHE-30x9-cm_CMJN-min-2048x768-1.jpg?resize=1536%2C576&amp;ssl=1 1536w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/LOGO-ARCHE-30x9-cm_CMJN-min-2048x768-1.jpg?resize=18%2C7&amp;ssl=1 18w\" sizes=\"auto, (max-width: 150px) 100vw, 150px\" \/><\/a><\/p>\n<\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\">\n<p class=\"has-text-align-center wp-block-paragraph\"><a href=\"https:\/\/gdr-msi.cnrs.fr\/fr\/\" target=\"_blank\" aria-label=\"Coordination du GdR (opens in a new tab)\" rel=\"noreferrer noopener\" class=\"ek-link\">GdR Coordination<\/a><\/p>\n\n\n\n<figure class=\"wp-block-image size-full\"><a href=\"https:\/\/gdr-msi.cnrs.fr\/fr\/\" target=\"_blank\" rel=\"noreferrer noopener\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" width=\"732\" height=\"210\" src=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/LOGO-GDR_MSI-1024x732-1.jpg?resize=732%2C210&#038;ssl=1\" alt=\"Logo GDR\" class=\"wp-image-1368\" srcset=\"https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/LOGO-GDR_MSI-1024x732-1.jpg?w=732&amp;ssl=1 732w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/LOGO-GDR_MSI-1024x732-1.jpg?resize=300%2C86&amp;ssl=1 300w, https:\/\/i0.wp.com\/proteome.u-bordeaux.fr\/wp-content\/uploads\/2023\/06\/LOGO-GDR_MSI-1024x732-1.jpg?resize=18%2C5&amp;ssl=1 18w\" sizes=\"auto, (max-width: 732px) 100vw, 732px\" \/><\/a><\/figure>\n<\/div>\n\n\n\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\"><\/div>\n<\/div>\n\n\n\n<h2 class=\"wp-block-heading has-accent-color has-text-color\">Our services<\/h2>\n\n\n\n<div class=\"wp-block-group is-nowrap is-layout-flex wp-container-core-group-is-layout-7387b849 wp-block-group-is-layout-flex\">\n<figure class=\"wp-block-table aligncenter caption-align-center is-style-regular has-medium-font-size\"><table class=\"has-fixed-layout\"><thead><tr><th class=\"has-text-align-center\" data-align=\"center\"><strong>Sample Preparation<\/strong><\/th><th class=\"has-text-align-center\" data-align=\"center\"><strong>Protein and peptide analysis<\/strong><\/th><th class=\"has-text-align-center\" data-align=\"center\"><strong>Data analysis<\/strong><\/th><th class=\"has-text-align-center\" data-align=\"center\"><strong>R&amp;D expertises<\/strong><\/th><\/tr><\/thead><tbody><tr><td class=\"has-text-align-center\" data-align=\"center\"><em>For Mass Spectrometry analysis<\/em><\/td><td class=\"has-text-align-center\" data-align=\"center\"><em>By high-resolution mass spectrometry<\/em><\/td><td class=\"has-text-align-center\" data-align=\"center\"><em>Bio-informatic treatment<\/em><\/td><td class=\"has-text-align-center\" data-align=\"center\"><em>The M3S team from CBMN<\/em><\/td><\/tr><tr><td class=\"has-text-align-center\" data-align=\"center\">Electrophoretic or chromatographic separation<br><br>Protein enrichment or depletion<br><br>Peptide sub-species enrichment (phosphoproteomics, glycosylation \u2026)<br><br>Various proteolysis solutions: in gel, in solution, multi-enzyme, trace studies \u2026<\/td><td class=\"has-text-align-center\" data-align=\"center\">High resolution MS and nanoLC-MS\/MS analyzes (Orbitrap)<br><br>Fast or resolving chromatographic gradients<br><br>CID, HCD, ETD, EThcD, UVPD fragmentations<\/td><td class=\"has-text-align-center\" data-align=\"center\">Software and hardware dedicated to identification, quantitation and characterization of proteins<br><br><span style=\"text-decoration: underline;\"><mark style=\"background-color:rgba(0, 0, 0, 0);color:#c8361b\" class=\"has-inline-color\"><a class=\"ek-link\" href=\"https:\/\/proteome.u-bordeaux.fr\/en\/2024\/02\/08\/lintelligence-artificielle-au-service-de-la-proteomique\/\">Chimerys, a database search algorithm based on Artificial Intelligence (AI)<\/a><\/mark><\/span><br><br>Omics data integration with the CBiB (bioinformatic cenetr from Bordeaux): statistical validation, Go terms enrichment, visualisation tools and result interpretation, proteome functional annotation<\/td><td class=\"has-text-align-center\" data-align=\"center\">Structural analysis by isotope exchange or cross-linking: conformational study, interaction, epitope mapping<br><br>MSI (Mass Spectrometry Imaging) of lipids, metabolits, peptides\/proteins<br><br>Intact protein analysis by Top-Down MS<br><br>Glycoproteins \/ glycopeptides analysis<br><br>Traces and ultra traces analysis<\/td><\/tr><\/tbody><\/table><\/figure>\n<\/div>","protected":false},"excerpt":{"rendered":"<p>UAR 2046 du CNRS depuis janvier 2026, Bordeaux Proteome est une plateforme scientifique et technologique de r\u00e9f\u00e9rence en prot\u00e9omique et spectrom\u00e9trie de masse. Ouverte aux communaut\u00e9s acad\u00e9miques comme aux acteurs priv\u00e9s, elle propose des expertises, des \u00e9quipements de pointe et des services adapt\u00e9s aux projets de recherche, de d\u00e9veloppement et [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"page-templates\/template-page-sidebar.php","meta":{"footnotes":""},"class_list":["post-44","page","type-page","status-publish","hentry"],"aioseo_notices":[],"aioseo_head":"\n\t\t<!-- All in One SEO 5.0.3 - aioseo.com -->\n\t<meta name=\"description\" content=\"A scientific and technological platform through the provision of services, materials and expertise in the field of proteomic analysis.\" \/>\n\t<meta name=\"robots\" content=\"max-image-preview:large\" \/>\n\t<link rel=\"canonical\" href=\"https:\/\/proteome.u-bordeaux.fr\/en\/\" \/>\n\t\t<meta name=\"generator\" content=\"All in One SEO (AIOSEO) 5.0.3\" 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